Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803246.1_cds_XP_016483511.1_7452
CDS Infomation

[gene=LOC107804177] [db_xref=GeneID:107804177] [protein=serine/threonine-protein kinase HT1-like] [protein_id=XP_016483511.1] [location=join(72780..73142,74819..75274,76375..76605)] [gbkey=CDS]
Sequence

ATGAAGAATTTCAACTGGTTTAAGCAAATAGTAGCAAATAATGGGAAACTAGAGAGGCGA
CTTTCATTGGGAGAGTACAAACGAGCAGCGTCATGGTCCAAATACATAGTATCATCAGGG
GCGGCGATAAAGGAGGAAGGAGAAGAGGAATGGAGCGCCGATATGTCACAGCTATATATA
GGGAACAAATTTGCTTCGGGTAGGCATAGTAGGATTTACAGGGGAATTTATAAGCACAGT
GAAGTGGCTATTAAACTCATTAGCCAGCCTGAGGAAGATGGTGACTTGGCTACTTTTTTG
GAGAAACAGTTTACTTCTGAGGTTGCTTTGTTGCTTCGGTTAAAGCATCCAAATATCATC
ACTTTTATTGCAGCATGTAAGAAACCACCAGTTTTTTGCATCATCACAGAGTACTTACCT
GGAGGCTCCCTAAGAAAATACCTCCATCAGCAGGAGCCACACTCGGTCCCTCTTAACCTA
GTTCTTAAATTGGCCGTTGACATTGCACGTGGAATGCAATATCTTCATGCTGAAGGGATA
CTTCACAGAGATCTCAAGTCAGAAAATCTACTCCTTGATGAAGATATGTGCGTGAAAGTC
GCAGATTTCGGGATATCATGTTTGGAATCTCAATGTGGTAGCCCAAAGGGGTTCACTGGT
ACGTACCGTTGGATGGCACCAGAAATGATCAAGGAAAAGAACCATACAAAGAAAGTTGAT
GTATATAGTTTCGGCATTGTCCTATGGGAACTTTTGACTGCATTGACACCATTTGATGAC
ATGACCCCCGAGCAGGCGGCATTTGCAGTCTGCCAGAAGAAAGCTAGACCAAAAATACCA
GCTGCATGTCCAGTAGCAGTTCGTAAACTCATTAAGCGGTGCTGGGCAAACAATCCTCAC
AAGCGGCCACAATTCGAGGAGATTGTGACAGTTCTTGAAAGTTACTCGGAGTCATTTGAG
CAAGATCCAGATTTTTTTCAGTCCTCTGAGCCCCATCGGAAATTTACCTTGTTGCAATGC
TTGCCTAAGTGCATTGAGGCCAACAGATAA

Peptide Sequence

PEP ID

XP_016483511.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana tabacum]
Sequence

MKNFNWFKQIVANNGKLERRLSLGEYKRAASWSKYIVSSGAAIKEEGEEEWSADMSQLYI
GNKFASGRHSRIYRGIYKHSEVAIKLISQPEEDGDLATFLEKQFTSEVALLLRLKHPNII
TFIAACKKPPVFCIITEYLPGGSLRKYLHQQEPHSVPLNLVLKLAVDIARGMQYLHAEGI
LHRDLKSENLLLDEDMCVKVADFGISCLESQCGSPKGFTGTYRWMAPEMIKEKNHTKKVD
VYSFGIVLWELLTALTPFDDMTPEQAAFAVCQKKARPKIPAACPVAVRKLIKRCWANNPH
KRPQFEEIVTVLESYSESFEQDPDFFQSSEPHRKFTLLQCLPKCIEANR

Transcript Sequence

Gene sequence data has not been registered.